Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2278420
rs2278420
0.010 GeneticVariation BEFREE ZNF350 L66P variant modifies the risk of breast cancer not only by itself but also in a gene-environment interaction manner with age, age at menarche, menopause status, or estrogen receptor status. 29653063

2018

dbSNP: rs80357275
rs80357275
0.010 GeneticVariation BEFREE ZNF350 L66P variant modifies the risk of breast cancer not only by itself but also in a gene-environment interaction manner with age, age at menarche, menopause status, or estrogen receptor status. 29653063

2018

dbSNP: rs56012641
rs56012641
0.010 GeneticVariation BEFREE Y179C, F486L and N550H are BRCA1 variants that may be associated with breast cancer in a Sicilian family: results of a 5-year GOIM (Gruppo Oncologico dell'Italia Meridionale) prospective study. 16760288

2006

dbSNP: rs55906931
rs55906931
0.010 GeneticVariation BEFREE Y179C, F486L and N550H are BRCA1 variants that may be associated with breast cancer in a Sicilian family: results of a 5-year GOIM (Gruppo Oncologico dell'Italia Meridionale) prospective study. 16760288

2006

dbSNP: rs80357400
rs80357400
0.010 GeneticVariation BEFREE Y179C, F486L and N550H are BRCA1 variants that may be associated with breast cancer in a Sicilian family: results of a 5-year GOIM (Gruppo Oncologico dell'Italia Meridionale) prospective study. 16760288

2006

dbSNP: rs861539
rs861539
0.100 GeneticVariation BEFREE XRCC3 codon 241 Thr/Met or Met/Met genotype moderately increased the risk of breast cancer (OR = 1.4, 95% CI: 0.87-2.33), but not significant in this study. 17063279

2007

dbSNP: rs25487
rs25487
0.100 GeneticVariation BEFREE XRCC1 Arg399Gln and Arg164Trp variant genotypes are associated with an increased risk of BC in Egyptian females. 25340946

2014

dbSNP: rs25487
rs25487
0.100 GeneticVariation BEFREE XRCC1 R399Q was not associated with breast cancer (O.R.1.00, 95% C.I.0.61-1.64). 16596326

2006

dbSNP: rs1047768
rs1047768
0.010 GeneticVariation BEFREE XPG rs1047768 was significantly associated with decreased PFS (HR 1.72; 95% CI 1.0-2.8) in breast cancer cases (P = 0.013) which was demonstrated by median time of 26 months for T > C variant when compared with median time of 37 months for TT genotype. 30255276

2018

dbSNP: rs1800975
rs1800975
XPA
0.040 GeneticVariation BEFREE XPA rs1800975 polymorphism may decrease the risk of breast cancer in both non-Asians and population-based patients. 29953005

2018

dbSNP: rs4756146
rs4756146
CAT
0.010 GeneticVariation BEFREE Women with ≥1 variant allele in CAT rs4756146 had a 23 % reduced risk of postmenopausal breast cancer compared with women with the common TT genotype (OR = 0.77; 95 % CI = 0.59-0.99). 23053794

2012

dbSNP: rs1695
rs1695
0.100 GeneticVariation BEFREE Women homozygous with the T allele in CYP1B1*2 (Ser(119); rs1056827) were at 1.69 (95% confidence interval, 1.17-2.46) times the risk of women homozygous with the G allele; women homozygous with the G allele in GSTP1 (Val(105); rs1695) were at 0.73 (95% confidence interval, 0.54-0.99) times the risk of breast cancer compared with women homozygous with the A allele. 19383894

2009

dbSNP: rs1056827
rs1056827
0.050 GeneticVariation BEFREE Women homozygous with the T allele in CYP1B1*2 (Ser(119); rs1056827) were at 1.69 (95% confidence interval, 1.17-2.46) times the risk of women homozygous with the G allele; women homozygous with the G allele in GSTP1 (Val(105); rs1695) were at 0.73 (95% confidence interval, 0.54-0.99) times the risk of breast cancer compared with women homozygous with the A allele. 19383894

2009

dbSNP: rs2214102
rs2214102
0.020 GeneticVariation BEFREE Women homozygous for the major ABCB1_rs2214102_G allele were found to be at a significantly increased breast cancer risk associated with combined estrogen-progestagen therapy [odds ratio (OR) = 1.17, 95% confidence interval (CI) = 1.12-1.23, P (interaction) = 0.022]. 19672706

2010

dbSNP: rs16942
rs16942
0.020 GeneticVariation BEFREE Women carrying the rare allele of single nucleotide polymorphism rs16942 on the wild-type copy of BRCA1 were at decreased risk of breast cancer (hazard ratio 0.86, 95% confidence interval 0.77-0.95, P = 0.003). 21890493

2011

dbSNP: rs1800056
rs1800056
ATM
0.020 GeneticVariation BEFREE Within the BC lines studied, the group composed of the six carrying the linked 2572T>C (858F>L) and 3161C>G (1054P>R) variants had a higher level of MN after IR exposure compared to that observed in the remaining four BC or in the normal cell lines. 15101044

2004

dbSNP: rs1800057
rs1800057
ATM
0.040 GeneticVariation BEFREE Within the BC lines studied, the group composed of the six carrying the linked 2572T>C (858F>L) and 3161C>G (1054P>R) variants had a higher level of MN after IR exposure compared to that observed in the remaining four BC or in the normal cell lines. 15101044

2004

dbSNP: rs762551
rs762551
0.050 GeneticVariation BEFREE Within a hospital-based case-control study, the effect of functional CYP1A2 variants [-3860G/A (rs2069514), -2467T/delT (rs3569413), -163C/A (rs762551)] and their interactions with environmental factors in BC risk was investigated. 23128882

2013

dbSNP: rs2069514
rs2069514
0.010 GeneticVariation BEFREE Within a hospital-based case-control study, the effect of functional CYP1A2 variants [-3860G/A (rs2069514), -2467T/delT (rs3569413), -163C/A (rs762551)] and their interactions with environmental factors in BC risk was investigated. 23128882

2013

dbSNP: rs3803662
rs3803662
0.800 GeneticVariation BEFREE With the exception of rs3803662 (TOX3), there was no evidence that any of the SNPs associated with BC susceptibility were associated with the BC survival. 22532573

2012

dbSNP: rs1130409
rs1130409
0.100 GeneticVariation BEFREE With respect to APE1 Asp148Glu polymorphism, no significant association with breast cancer risk was demonstrated in the overall and stratified analyses. 24893568

2014

dbSNP: rs397507444
rs397507444
0.100 GeneticVariation BEFREE With respect to A1298C polymorphism, no significant association with breast cancer risk was demonstrated in overall, ethnicity- and menopausal status-based population. 20135343

2010

dbSNP: rs67068737
rs67068737
0.010 GeneticVariation BEFREE With genetic changes in the syndecans and their association with breast cancers plausible, we examined two single nucleotide polymorphisms in SDC1 (rs1131351) and SDC4 (rs67068737) within an Australian Caucasian breast cancer case/control population. 25361632

2015

dbSNP: rs1057519365
rs1057519365
A 0.700 CausalMutation CLINVAR Whole-exome sequencing identifies rare pathogenic variants in new predisposition genes for familial colorectal cancer. 25058500

2015

dbSNP: rs1555460533
rs1555460533
A 0.700 CausalMutation CLINVAR Whole-exome sequencing and targeted gene sequencing provide insights into the role of PALB2 as a male breast cancer susceptibility gene. 27648926

2017